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IDSAM23877_6437 TypeCDS
From6939036 nt length579
To6939614 aa length192
Gene pI6.14
Definitionputative transcriptional regulator M.W (Da) 20900
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6802 putative DNA-binding protein3413.0e-122

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix19-7152.53.4e-14

HTH_311Helix-turn-helix domain14-6949.53.6e-13

HTH_191Helix-turn-helix domain17-7537.91.3e-09

HTH_261Cro/C1-type HTH DNA-binding domain18-7429.85.5e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053140024.1 helix-turn-helix domain-containing protein [Streptomyces amb... 8916.0e-121
WP_210964404.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8273.8e-111
WP_226025837.1 XRE family transcriptional regulator [Streptomyces hyderabad... 8101.6e-108
WP_030189450.1 XRE family transcriptional regulator [Streptomyces violaceor... 8092.2e-108
WP_115745428.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8041.2e-107
WP_003972196.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8031.8e-107
WP_109028737.1 XRE family transcriptional regulator [Streptomyces rubrogris... 8022.2e-107
WP_164276657.1 XRE family transcriptional regulator [Streptomyces rubrogris... 8022.4e-107
WP_225635531.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 8022.5e-107
WP_122616449.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7996.3e-107

PSORT result

LocalizationCertaintyPSORT said
Not Clear