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IDSAM23877_6533 TypeCDS
From7046134 nt length576
To7046709 aa length191
Gene pI6.94
Definitionputative RNA polymerase sigma factor M.W (Da) 21421
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6996 putative RNA polymerase sigma factor3371.0e-120

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 225-9142.92.7e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AKZ59578.1 putative RNA polymerase sigma factor [Streptomyces ambofaciens AT... 8932.7e-121
WP_174532313.1 sigma-70 family RNA polymerase sigma factor [Streptomyces am... 8901.7e-120
KYK15315.1 RNA polymerase subunit sigma-24 [Streptomyces sp. CC71] >gb 8803.5e-119
OKI85414.1 RNA polymerase subunit sigma-24 [Streptomyces sp. CB02414] 8786.6e-119
QCB25896.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SS5... 8779.2e-119
OSC66041.1 RNA polymerase subunit sigma-24 [Streptomyces sp. 4F] 8761.1e-118
PAK22520.1 RNA polymerase subunit sigma-24 [Streptomyces sp. alain-838] 8761.2e-118
WP_019330541.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 8762.8e-118
WP_198941395.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 8762.9e-118
KFG72460.1 RNA polymerase sigma24 factor [Streptomyces mutabilis] 8733.8e-118

PSORT result

LocalizationCertaintyPSORT said
Not Clear