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IDSAM23877_7103 TypeCDS
From7668017 nt length504
To7668520 aa length167
Gene pI4.53
Definitionputative DNA-binding protein M.W (Da) 17777
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6439 putative DNA binding protein1293.0e-39

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain4-6457.67.8e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063484055.1 cold shock domain-containing protein [Streptomyces ambofacie... 8604.6e-117
CAJ88198.1 putative DNA-binding protein [Streptomyces ambofaciens ATCC 2387... 8553.0e-116
WP_171987637.1 cold shock domain-containing protein [Streptomyces sp. MP131... 5121.9e-64
ONK10137.1 Cold shock-like protein CspG [Streptomyces sp. MP131-18] 5105.3e-64
ARQ72105.1 DNA-binding protein [Streptomyces sp. SCSIO 3032] 4897.0e-61
WP_176582846.1 cold shock domain-containing protein [Streptomyces sp. SCSIO... 4888.8e-61
WP_120699271.1 MULTISPECIES: cold shock domain-containing protein [unclassi... 4881.0e-60
WP_049572601.1 cold shock domain-containing protein [Streptomyces sp. SBT34... 4862.0e-60
WP_226077934.1 cold shock domain-containing protein [Streptomyces sp. SCSIO... 4843.1e-60
WP_113687829.1 cold shock domain-containing protein [Streptomyces sp. PT12]... 4801.6e-59

PSORT result

LocalizationCertaintyPSORT said
Not Clear