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IDSAM23877_7553 TypeCDS
From8217861 nt length1500
To8216362 aa length499
Gene pI11.79
Definitionputative DEAD-box RNA helicase M.W (Da) 52904
NoteEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4155 putative ATP-dependent RNA helicase7970.0e+00
sgrSGR_3511 putative ATP-dependent RNA helicase7120.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase93-260148.41.6e-43

Helicase_C1Helicase conserved C-terminal domain304-40389.12.2e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053125739.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 22960.0e+00
WP_063482720.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 22880.0e+00
WP_053135134.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 22820.0e+00
WP_063480846.1 DEAD/DEAH box helicase [Streptomyces ambofaciens] >gb 22670.0e+00
WP_055421495.1 DEAD/DEAH box helicase [Streptomyces pactum] >gb 21260.0e+00
WP_133886445.1 DEAD/DEAH box helicase [Streptomyces sp. BK208] >lcl 21200.0e+00
WP_175408626.1 DEAD/DEAH box helicase [Streptomyces sp. TRM64462] 21200.0e+00
WP_145866749.1 DEAD/DEAH box helicase [Streptomyces capillispiralis] >lcl 21170.0e+00
WP_184985481.1 DEAD/DEAH box helicase [Streptomyces caelestis] >lcl 21100.0e+00
WP_215172309.1 DEAD/DEAH box helicase [Streptomyces sp. ISL-12] >lcl 21090.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear