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IDSAM23877_7554 TypeCDS
From8218413 nt length204
To8218210 aa length67
GenecspD pI4.54
Definitioncold shock protein-like protein M.W (Da) 7115
NoteEvidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1622933%2C 21160192%2C 2186030%2C 9868784%3B Product type f : factor AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5921 scoF4 cold-shock domain protein1364.0e-45

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65100.23.8e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973099.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3423.1e-41
WP_028810498.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3406.5e-41
WP_042169227.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3399.9e-41
WP_145830460.1 cold-shock protein [Streptomyces sp. T12] >lcl 3399.9e-41
WP_030212013.1 cold-shock protein [Streptomyces sp. NRRL WC-3626] 3399.9e-41
WP_030349225.1 cold-shock protein [Streptomyces sp. NRRL S-1022] 3381.2e-40
WP_205043802.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3381.2e-40
WP_191850762.1 cold-shock protein [Streptomyces anthocyanicus] >dbj 3381.3e-40
WP_023586105.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.3e-40
WP_023586116.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3371.7e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear