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IDSAVERM_1021 TypeCDS
From1288711 nt length1194
To1287518 aa length397
GenecrtY pI10.68
Definitionlycopene cyclase M.W (Da)43161
Notecrt gene cluster, PF05834: Lycopene cyclase protein AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryantibiotic production

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0191 putative lycopene cyclase3949.0e-137
sgrSGR_7085t putative lycopene cyclase4122.0e-143
samSAM23877_7077 putative lycopene cyclase4071.0e-141
scabSCAB5491 lycopene cyclase5690.0e+00
nfarnfa34900 lycopene cyclase562.8e-09

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Lycopene_cycl1Lycopene cyclase protein5-383430.45.5e-129

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497680.1 lycopene cyclase family protein [Streptomyces sp. SID5469] 18370.0e+00
WP_200724164.1 MULTISPECIES: lycopene cyclase family protein [unclassified ... 14920.0e+00
WP_189918812.1 lycopene cyclase family protein [Streptomyces asoensis] >dbj... 14860.0e+00
OQR63123.1 lycopene cyclase [Streptomyces sp. B9173] 14410.0e+00
WP_148011584.1 lycopene cyclase family protein [Streptomyces sp. me109] >lc... 14370.0e+00
WP_190037077.1 lycopene cyclase family protein [Streptomyces fructofermenta... 14320.0e+00
WP_217456458.1 lycopene cyclase family protein [Streptomyces sp. BV286] >lc... 14070.0e+00
OQQ19922.1 lycopene cyclase [Streptomyces sp. M41(2017)] 13890.0e+00
WP_107482724.1 lycopene cyclase family protein [Streptomyces sp. M41(2017)] 13870.0e+00
WP_239155791.1 lycopene cyclase family protein [Streptomyces sp. SID14446] 13830.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.