| ID | SAVERM_1023
| Type | CDS
|
| From | 1290262
| nt length | 1542
|
| To | 1291803
| aa length | 513
|
| Gene | crtI
| pI | 10.31
|
| Definition | phytoene desaturase
| M.W (Da) | 54816
|
| Note | crt gene cluster, PF01593: Flavin containing amine oxidoreductase
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO0186 putative phytoene dehydrogenase (phytoene desaturase) | 694 | 0.0e+00
|
| sgr | SGR_6829 putative phytoene dehydrogenase | 771 | 0.0e+00
|
| sam | SAM23877_0813 Phytoene dehydrogenase | 747 | 0.0e+00
|
| scab | SCAB5451 phytoene desaturase | 818 | 0.0e+00
|
| sace | SACE_1713 phytoene desaturase | 661 | 0.0e+00
|
| nfar | nfa43990 phytoene desaturase | 582 | 3.4e-167
|
| cglu | gi|19551856 phytoene desaturase [Corynebacterium glutamicum] | 164 | 7.0e-42
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Amino_oxidase | 1 | Flavin containing amine oxidoreductase | 19-490 | 177.6 | 5.1e-52
|
| DAO | 1 | FAD dependent oxidoreductase | 11-291 | 64.0 | 1.7e-17
|
| NAD_binding_8 | 1 | NAD(P)-binding Rossmann-like domain | 14-69 | 38.9 | 7.2e-10
|
| FAD_binding_2 | 1 | FAD binding domain | 12-40 | 33.9 | 1.7e-08
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2508 | Seems to have an uncleavable N-term signal seq
|