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IDSAVERM_1163 TypeCDS
From1453280 nt length879
To1454158 aa length292
Gene pI6.23
Definitionputative LysR-family transcriptional regulator M.W (Da)31404
NotePF03466: LysR substrate binding domain AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7270 putative transcriptional regulator4685.0e-169
sgrSGR_1159 putative LysR-family transcriptional regulator3161.0e-108
samSAM23877_0946 putative transcriptional regulator4628.0e-167
scabSCAB85311 putative LysR-family transcriptional regulator4585.0e-165
saceSACE_3079 LysR-family transcriptional regulator2856.0e-97
paerPA3122 [gene=PA3122] [prot=probable transcriptional regulator] [comment=PA3122]1331.7e-32

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-291159.56.7e-47

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6277.55.1e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053749809.1 LysR substrate-binding domain-containing protein [Streptomyc... 11687.4e-160
WP_016433254.1 LysR substrate-binding domain-containing protein [Streptomyc... 11462.6e-156
WP_030927303.1 LysR substrate-binding domain-containing protein [Streptomyc... 11443.8e-156
WP_232651926.1 LysR substrate-binding domain-containing protein [Streptomyc... 11435.6e-156
NUR05080.1 LysR family transcriptional regulator [Streptomyces sp.] 11436.8e-156
WP_123962829.1 LysR substrate-binding domain-containing protein [Streptomyc... 11428.6e-156
WP_128804056.1 MULTISPECIES: LysR substrate-binding domain-containing prote... 11429.4e-156
WP_108012827.1 LysR substrate-binding domain-containing protein [Streptomyc... 11392.7e-155
WP_217242690.1 LysR substrate-binding domain-containing protein [Streptomyc... 11271.7e-153
WP_225096051.1 LysR substrate-binding domain-containing protein [Streptomyc... 11272.3e-153

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1465 Seems to have no N-terminal signal seq.