-- | --

IDSAVERM_1271 TypeCDS
From1578050 nt length627
To1577424 aa length208
Gene pI4.72
Definitionputative DNA-binding protein M.W (Da)22236
NotePF01381: Helix-turn-helix AseI frg.P
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0174 putative DNA-binding protein1943.0e-62
scabSCAB10281 putative DNA-binding protein2142.0e-70
nfarnfa28920 hypothetical protein631.6e-11
mtubgi|15607222 hypothetical protein Rv0080 [Mycobacterium tuberculosis H37Rv]807.7e-17
cglugi|19553734 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum]512.7e-08

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pyridox_ox_21Pyridoxamine 5'-phosphate oxidase85-20480.97.9e-23

HTH_311Helix-turn-helix domain2-5838.21.2e-09

HTH_191Helix-turn-helix domain2-6032.94.4e-08

HTH_31Helix-turn-helix7-5730.42.8e-07

Putative_PNPOx1Pyridoxamine 5'-phosphate oxidase85-16923.93.4e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_181648370.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7743.4e-102
WP_097228660.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7725.6e-102
WP_168499615.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7717.8e-102
WP_075030863.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7718.3e-102
QIZ00382.1 helix-turn-helix domain-containing protein [Streptomyces sp. S1D4... 7664.6e-101
WP_095850436.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7631.6e-100
WP_097288162.1 MULTISPECIES: pyridoxamine 5'-phosphate oxidase family prote... 7388.8e-97
WP_190228459.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7301.2e-95
WP_143604501.1 MULTISPECIES: pyridoxamine 5'-phosphate oxidase family prote... 7292.1e-95
WP_168531929.1 pyridoxamine 5'-phosphate oxidase family protein [Streptomyc... 7161.9e-93

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4698 Seems to have no N-terminal signal seq.