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IDSAVERM_1303 TypeCDS
From1611497 nt length420
To1611916 aa length139
Gene pI5.6
Definitionhypothetical protein M.W (Da)15505
NotePF02136: Nuclear transport factor 2 (NTF2) domain AseI frg.P
SignalP v.4.0Non-secretory protein | plot Categoryno similarity

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB83661 hypothetical protein2075.0e-71
nfarnfa41920 hypothetical protein435.2e-06
mtubgi|15607900 hypothetical protein Rv0760c [Mycobacterium tuberculosis H37Rv]273.9e-01
paerPA0557 [gene=PA0557] [prot=hypothetical protein] [comment=PA0557]308.1e-02

*scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SnoaL_21SnoaL-like domain19-11858.01.1e-15

DUF44401Domain of unknown function (DUF4440)15-10025.61.1e-05

SnoaL_31SnoaL-like domain16-12923.45e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_019068978.1 nuclear transport factor 2 family protein [Streptomyces hoku... 5387.2e-69
WP_095932434.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5361.5e-68
WP_028799559.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5318.2e-68
5301.5e-67
WP_234467466.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5291.7e-67
WP_201047645.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5282.7e-67
WP_033278656.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5249.4e-67
WP_062697204.1 nuclear transport factor 2 family protein [Streptomyces rega... 5249.5e-67
WP_200679294.1 nuclear transport factor 2 family protein [Streptomyces sp. ... 5231.2e-66
WP_150505295.1 nuclear transport factor 2 family protein [Streptomyces char... 5203.9e-66

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1423 Seems to have no N-terminal signal seq.