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IDSAVERM_1419 TypeCDS
From1753476 nt length1938
To1751539 aa length645
Gene pI5.93
Definitionhypothetical protein M.W (Da)69083
NotePF01590: GAF domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1011 hypothetical protein9220.0e+00
sgrSGR_1197 conserved hypothetical protein4982.0e-170
samSAM23877_1108 putative regulator of polyketide synthase expression9340.0e+00
saceSACE_3716 GAF domain protein4571.0e-154
nfarnfa20210 transcriptional regulator621.2e-10

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_301PucR C-terminal helix-turn-helix domain578-63665.82e-18

GAF_21GAF domain95-23865.74.7e-18

GAF1GAF domain96-23760.32.7e-16

GAF_31GAF domain96-23838.61.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_103844868.1 GAF domain-containing protein [Streptomyces sp. Ru72] >gb 19950.0e+00
WP_200420088.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19880.0e+00
WP_189183994.1 helix-turn-helix domain-containing protein [Streptomyces alb... 19630.0e+00
WP_099503223.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 19560.0e+00
GGN49622.1 cyclic diguanylate phosphodiesterase [Streptomyces albiflavescen... 19340.0e+00
WP_200400290.1 GAF domain-containing protein [Streptomyces sp. ZYC-3] >gb 19240.0e+00
WP_143633435.1 GAF domain-containing protein [Streptomyces sp. IB201691-2A2... 19130.0e+00
WP_103553877.1 GAF domain-containing protein [Streptomyces populi] >gb 19090.0e+00
WP_067029851.1 GAF domain-containing protein [Streptomyces dysideae] >gb 19000.0e+00
WP_053847325.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18990.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.2572 Seems to have no N-terminal signal seq.