| ID | SAVERM_1425
| Type | CDS
|
| From | 1759331
| nt length | 786
|
| To | 1758546
| aa length | 261
|
| Gene | murI
| pI | 5.33
|
| Definition | putative glutamate racemase
| M.W (Da) | 26646
|
| Note | PF01177: Asp/Glu/Hydantoin racemase
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1018 putative isomerase | 365 | 3.0e-129
|
| sgr | SGR_6566 putative glutamate racemase | 322 | 2.0e-112
|
| sam | SAM23877_1113 putative glutamate racemase | 355 | 2.0e-125
|
| scab | SCAB83081 putative glutamate racemase | 349 | 5.0e-123
|
| sace | SACE_1209 glutamate racemase | 79 | 3.0e-18
|
| nfar | nfa50700 murI glutamate racemase | 208 | 3.4e-55
|
| mtub | gi|15608478 glutamate racemase [Mycobacterium tuberculosis H37Rv] | 84 | 5.6e-18
|
| cglu | gi|19553709 COG0796:Glutamate racemase [Corynebacterium glutamicum] | 73 | 7.0e-15
|
| bsub | BG12306 yrpC; glutamate racemase [EC:5.1.1.3] | 74 | 5.1e-15
|
| ecoli | gi|16131805 glutamate racemase [Escherichia coli K12] | 105 | 3.1e-24
|
| paer | PA4662 [gene=murI] [prot=glutamate racemase] [comment=PA4662] | 102 | 4.6e-23
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Asp_Glu_race | 1 | Asp/Glu/Hydantoin racemase | 29-194 | 43.2 | 3.7e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_107083161.1 | aspartate/glutamate racemase family protein [Streptomyces sp...
| 1004 | 1.5e-135 |
| GHH42997.1 | glutamate racemase [Streptomyces umbrinus]
| 852 | 7.8e-113 |
| WP_190228641.1 | aspartate/glutamate racemase family protein [Streptomyces um...
| 852 | 4.5e-112 |
| WP_189838687.1 | aspartate/glutamate racemase family protein [Streptomyces um...
| 845 | 1.3e-111 |
| WP_079052731.1 | aspartate/glutamate racemase family protein [Streptomyces ph...
| 846 | 4.6e-111 |
| WP_234048576.1 | aspartate/glutamate racemase family protein [Streptomyces sp...
| 838 | 1.2e-110 |
| WP_228033994.1 | aspartate/glutamate racemase family protein [Streptomyces sp...
| 835 | 2.8e-110 |
| QQM45479.1 | aspartate/glutamate racemase family protein [Streptomyces sp. ZYC...
| 838 | 6.9e-110 |
| MPY57292.1 | glutamate racemase [Streptomyces spongiae]
| 835 | 8.0e-110 |
| WP_149514939.1 | aspartate/glutamate racemase family protein [Streptomyces ap...
| 831 | 1.7e-109 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|