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IDSAVERM_1517 TypeCDS
From1859956 nt length939
To1860894 aa length312
Gene pI9.1
Definitionputative LysR-family transcriptional regulator M.W (Da)34192
NotePF03466: LysR substrate binding domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
nfarnfa14310 transcriptional regulator2161.6e-57
paerPA1826 [gene=PA1826] [prot=probable transcriptional regulator] [comment=PA1826]1416.7e-35

*nfar, Nocardia farcinica IFM 10152; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain96-300147.04.4e-43

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family11-6964.74.9e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037683516.1 LysR substrate-binding domain-containing protein [Streptomyc... 11431.9e-155
WP_037677404.1 LysR family transcriptional regulator [Streptomyces griseus] 11092.5e-150
WP_217238588.1 LysR substrate-binding domain-containing protein [Streptomyc... 11041.5e-149
EFL35916.1 LysR family transcriptional regulator [Streptomyces viridochromog... 10902.6e-147
WP_104780881.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 10813.9e-146
WP_053671140.1 LysR family transcriptional regulator [Streptomyces sp. NRRL... 10762.1e-145
WP_039934080.1 LysR substrate-binding domain-containing protein [Streptomyc... 10753.2e-145
WP_234846282.1 LysR family transcriptional regulator [Streptomyces indiaens... 10711.3e-144
WP_189726277.1 LysR substrate-binding domain-containing protein [Streptomyc... 10674.7e-144
WP_190060032.1 LysR family transcriptional regulator [Streptomyces echinoru... 10607.5e-143

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1198 Seems to have no N-terminal signal seq.