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IDSAVERM_1534 TypeCDS
From1878051 nt length477
To1878527 aa length158
Gene pI6.36
Definitionputative AsnC-family transcriptional regulator M.W (Da)17044
NotePF01037: AsnC family AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1119 putative asnC-family transcriptional regulatory protein2853.0e-101
sgrSGR_6494 putative AsnC-family transcriptional regulator2675.0e-94
samSAM23877_1202 putative AsnC-family transcriptional regulatory protein2861.0e-101
scabSCAB82331 putative AsnC-family transcriptional regulator2811.0e-99
nfarnfa10200 transcriptional regulator1104.4e-26

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain69-13971.15.1e-20

HTH_241Winged helix-turn-helix DNA-binding4-5050.69.3e-14

HTH_AsnC-type1AsnC-type helix-turn-helix domain4-4442.63.6e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189713488.1 Lrp/AsnC family transcriptional regulator [Streptomyces phae... 7605.8e-102
WP_235460108.1 Lrp/AsnC family transcriptional regulator [Streptomyces oliv... 7588.7e-102
WP_190176815.1 Lrp/AsnC family transcriptional regulator [Streptomyces naga... 7571.6e-101
WP_110626609.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7562.1e-101
WP_009301667.1 Lrp/AsnC family transcriptional regulator [Streptomyces ipom... 7562.1e-101
WP_093903737.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7552.9e-101
WP_062152997.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7553.0e-101
WP_058928549.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7543.4e-101
WP_210586215.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7543.4e-101
WP_210571317.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7543.7e-101

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2095 Seems to have no N-terminal signal seq.