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IDSAVERM_1570 TypeCDS
From1933733 nt length1782
To1935514 aa length593
GenemdlB pI6.88
Definitionputative ABC transporter ATP-binding protein (bacterial ATP-binding cassette, subfamily C) M.W (Da)63425
NotePF00005: ABC transporter AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1148 putative ABC transporter9980.0e+00
sgrSGR_6323 putative ABC transporter ATPase and permease component9290.0e+00
samSAM23877_1231 putative ABC transporter10140.0e+00
scabSCAB80041 putative ABC transporter ATP-binding protein9950.0e+00
saceSACE_7157 putative ABC transporter ATP-binding protein4052.0e-135

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region44-31287.79.3e-25

ABC_tran1ABC transporter372-52187.51.1e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189184223.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 23980.0e+00
WP_099503414.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 23800.0e+00
WP_095932682.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 23690.0e+00
QIY94296.1 ABC transporter ATP-binding protein [Streptomyces sp. S1D4-11] 23610.0e+00
WP_190169191.1 ABC transporter ATP-binding protein/permease [Streptomyces m... 23590.0e+00
WP_212727806.1 ABC transporter ATP-binding protein/permease [Streptomyces m... 23580.0e+00
WP_030931481.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 23570.0e+00
WP_123963444.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 23540.0e+00
WP_097226566.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 23530.0e+00
WP_168489722.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 23530.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4015 Seems to have no N-terminal signal seq.