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IDSAVERM_1626 TypeCDS
From1995481 nt length906
To1994576 aa length301
Gene pI5.78
Definitionputative LysR-family transcriptional regulator M.W (Da)31655
NotePF03466: LysR substrate binding domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6801 putative LysR-family transcriptional regulator5170.0e+00
sgrSGR_1442 putative LysR-family transcriptional regulator4823.0e-174
samSAM23877_6436 putative LysR-family transcriptional regulator5180.0e+00
scabSCAB12661 putative LysR-family transcriptional regulator5140.0e+00
saceSACE_6391 LysR-family transcriptional regulator2932.0e-100
nfarnfa26710 transcriptional regulator1854.8e-48
cglugi|19551840 COG0583:Transcriptional regulator [Corynebacterium glutamicum]1322.6e-32

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-298131.62.2e-38

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6370.95.9e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037617964.1 LysR family transcriptional regulator [Streptomyces aureus] 11768.4e-161
WP_103549069.1 LysR family transcriptional regulator [Streptomyces populi] ... 11751.2e-160
WP_164371375.1 LysR family transcriptional regulator [Streptomyces sp. SID1... 11724.3e-160
WP_200420297.1 LysR family transcriptional regulator [Streptomyces sp. Y2F8... 11715.4e-160
WP_071369175.1 LysR family transcriptional regulator [Streptomyces colonosa... 11716.7e-160
WP_151472940.1 LysR family transcriptional regulator [Streptomyces triticir... 11716.7e-160
WP_103844945.1 LysR family transcriptional regulator [Streptomyces sp. Ru72... 11681.4e-159
WP_189185848.1 LysR family transcriptional regulator [Streptomyces albiflav... 11681.6e-159
WP_081220447.1 LysR family transcriptional regulator [Streptomyces sp. M41(... 11681.9e-159
WP_028798864.1 LysR family transcriptional regulator [Streptomyces sp. 142M... 11672.6e-159

PSORT result

LocalizationCertaintyPSORT said
membrane0.2126 Seems to have no N-terminal signal seq.