| ID | SAVERM_1648
| Type | CDS
|
| From | 2019544
| nt length | 1023
|
| To | 2018522
| aa length | 340
|
| Gene |
| pI | 7.42
|
| Definition | hypothetical protein
| M.W (Da) | 38474
|
| Note | PF04055: Radical SAM superfamily
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6766 hypothetical protein | 674 | 0.0e+00
|
| sgr | SGR_960 conserved hypothetical protein | 667 | 0.0e+00
|
| sam | SAM23877_6416 hypothetical protein | 671 | 0.0e+00
|
| scab | SCAB12931 hypothetical protein | 690 | 0.0e+00
|
| sace | SACE_4325 radical SAM | 475 | 2.0e-170
|
| nfar | nfa49430 hypothetical protein | 60 | 2.1e-10
|
| bsub | BG12471 albA, ywiA; subtilosin production | 50 | 1.9e-07
|
| paer | PA0511 [gene=nirJ] [prot=heme d1 biosynthesis protein NirJ] [comment=PA0511] | 64 | 1.2e-11
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3463 | 1 | Domain of unknown function (DUF3463) | 196-328 | 192.3 | 2.5e-57
|
| Radical_SAM | 1 | Radical SAM superfamily | 34-187 | 59.4 | 5.1e-16
|
| Fer4_14 | 1 | 4Fe-4S single cluster domain | 37-112 | 24.8 | 1.8e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_200394681.1 | adenosyl-hopene transferase HpnH [Streptomyces sp. ZYC-3] >g...
| 1788 | 0.0e+00 |
| WP_062783088.1 | MULTISPECIES: adenosyl-hopene transferase HpnH [Streptomyces...
| 1785 | 0.0e+00 |
| WP_217458706.1 | adenosyl-hopene transferase HpnH [Streptomyces sp. BV286] >l...
| 1785 | 0.0e+00 |
| WP_138042933.1 | adenosyl-hopene transferase HpnH [Streptomyces montanus] >lc...
| 1785 | 0.0e+00 |
| WP_055509571.1 | MULTISPECIES: adenosyl-hopene transferase HpnH [Streptomyces...
| 1784 | 0.0e+00 |
| WP_143634335.1 | adenosyl-hopene transferase HpnH [Streptomyces sp. IB201691-...
| 1782 | 0.0e+00 |
| WP_055616155.1 | adenosyl-hopene transferase HpnH [Streptomyces phaeochromoge...
| 1781 | 0.0e+00 |
| WP_037704103.1 | MULTISPECIES: adenosyl-hopene transferase HpnH [Streptomyces...
| 1781 | 0.0e+00 |
| CBG68452.1 | conserved hypothetical protein [Streptomyces scabiei 87.22]
| 1780 | 0.0e+00 |
| EMF52203.1 | hypothetical protein SBD_6725 [Streptomyces bottropensis ATCC 254...
| 1779 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2797 | Seems to have no N-terminal signal seq.
|