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IDSAVERM_1651 TypeCDS
From2023436 nt length1131
To2022306 aa length376
GenehopB pI4.78
Definitionfarnesyl diphosphate synthase M.W (Da)40037
Notesqualene/hopene gene cluster, PF00348: Polyprenyl synthetase AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryantibiotic production

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6763 putative polyprenyl synthatase6430.0e+00
sgrSGR_963 putative polyprenyl diphosphate synthase5980.0e+00
samSAM23877_6413 (2E, 6E)-farnesyl diphosphate synthase6640.0e+00
scabSCAB12961 polyprenyl diphosphate synthase6350.0e+00
saceSACE_3979 dimethylallyltranstransferase / geranyltranstransferase / geranylgeranyl pyrophosphate synthetase2963.0e-99

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

polyprenyl_synt1Polyprenyl synthetase84-309180.04e-53

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497778.1 polyprenyl synthetase family protein [Streptomyces sp. SID54... 13230.0e+00
KUN49531.1 dimethylallyltranstransferase [Streptomyces olivochromogenes] 12811.5e-174
WP_079064752.1 MULTISPECIES: polyprenyl synthetase family protein [Streptom... 12831.5e-174
QIY99729.1 polyprenyl synthetase family protein [Streptomyces sp. S1D4-11] 12761.6e-173
WP_075030353.1 MULTISPECIES: polyprenyl synthetase family protein [Streptom... 12752.0e-173
WP_192583473.1 polyprenyl synthetase family protein [Streptomyces albicerus... 12714.5e-173
WP_095937881.1 polyprenyl synthetase family protein [Streptomyces sp. Tue60... 12631.6e-171
WP_078628826.1 polyprenyl synthetase family protein [Streptomyces sp. 142MF... 12622.0e-171
WP_168531195.1 polyprenyl synthetase family protein [Streptomyces sp. RPA4-... 12622.2e-171
NGO09955.1 polyprenyl synthetase family protein [Streptomyces scabichelini] 12622.5e-171

PSORT result

LocalizationCertaintyPSORT said
membrane0.2020 Seems to have no N-terminal signal seq.