| ID | SAVERM_1652 | Type | CDS |
| From | 2024860 | nt length | 1428 |
| To | 2023433 | aa length | 475 |
| Gene | hopC | pI | 7.31 |
| Definition | squalene/phytoene dehydrogenase | M.W (Da) | 50232 |
| Note | squalene/hopene gene cluster, sqd, PF01593: Flavin containing amine oxidoreductase | AseI frg. | C |
| SignalP v.4.0 | Non-secretory protein | plot | Category | metabolism of lipids |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| coel | SCO6762 putative phytoene dehydrogenase | 741 | 0.0e+00 |
| sgr | SGR_964 putative squalene/phytoene dehydrogenase | 638 | 0.0e+00 |
| sam | SAM23877_6412 Phytoene desaturase, pro-zeta-carotene producing | 701 | 0.0e+00 |
| scab | SCAB12971 squalene/phytoene dehydrogenase | 697 | 0.0e+00 |
| sace | SACE_4329 squalene/phytoene dehydrogenase | 372 | 4.0e-126 |
| paer | PA0421 [gene=PA0421] [prot=hypothetical protein] [comment=PA0421] | 48 | 1.3e-06 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| Amino_oxidase | 1 | Flavin containing amine oxidoreductase | 29-456 | 169.7 | 1.2e-49 | |
| NAD_binding_8 | 1 | NAD(P)-binding Rossmann-like domain | 24-76 | 46.2 | 3.8e-12 | |
| FAD_oxidored | 1 | FAD dependent oxidoreductase | 23-90 | 37.1 | 2.2e-09 | |
| FAD_binding_2 | 1 | FAD binding domain | 22-58 | 28.3 | 8.4e-07 | |
| GIDA | 1 | Glucose inhibited division protein A | 23-48 | 23.9 | 1.8e-05 |
| ID | Description | Score | E-value |
| WP_151482498.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces albicerus] | 1664 | 0.0e+00 |
| WP_143634327.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces sp. IB20169... | 1664 | 0.0e+00 |
| WP_055616159.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces phaeochromo... | 1664 | 0.0e+00 |
| WP_200394685.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces sp. ZYC-3] ... | 1663 | 0.0e+00 |
| WP_190227420.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces umbrinus] >... | 1660 | 0.0e+00 |
| WP_189839538.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces umbrinus] >... | 1654 | 0.0e+00 |
| WP_189772318.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces tauricus] >... | 1646 | 0.0e+00 |
| WP_189185875.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces albiflavesc... | 1633 | 0.0e+00 |
| WP_217458703.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces sp. BV286] ... | 1631 | 0.0e+00 |
| WP_095851341.1 | hydroxysqualene dehydroxylase HpnE [Streptomyces sp. Ag82_O1... | 1622 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| membrane | 0.2763 | Seems to have no N-terminal signal seq. |