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IDSAVERM_1857 TypeCDS
From2283006 nt length1875
To2281132 aa length624
GeneguxA3 pI5.03
Definitionputative secreted glycosyl hydrolase M.W (Da)66723
NoteTat substrate, PF01839: FG-GAP repeat AseI frg.C
SignalP v.4.0Signal peptide | plot Categoryspecific pathways

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6542 putative secreted protein10370.0e+00
samSAM23877_6247 Rhamnogalacturonan endolyase YesW10230.0e+00
scabSCAB17041 putative secreted glycosyl hydrolase9640.0e+00
bsubBG12857 yesW; similar to hypothetical proteins from B. subtilis7000.0e+00

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_159029006.1 MULTISPECIES: rhamnogalacturonan lyase [Streptomyces] >gb 28870.0e+00
SFF67435.1 hypothetical protein SAMN02787118_110234 [Streptomyces mirabilis... 27890.0e+00
KUN49025.1 hypothetical protein AQJ27_05165 [Streptomyces olivochromogenes] ... 27720.0e+00
SOE57533.1 hypothetical protein SAMN05446589_1223 [Streptomyces sp. OV198] 27690.0e+00
GGN87637.1 rhamnogalacturonan lyase [Streptomyces albiflavescens] 27650.0e+00
WP_218171509.1 rhamnogalacturonan lyase [Streptomyces mirabilis] 27620.0e+00
WP_181649211.1 rhamnogalacturonan lyase [Streptomyces sp. WAC00263] 27600.0e+00
QIY99411.1 rhamnogalacturonan lyase [Streptomyces sp. S1D4-11] 27590.0e+00
WP_218902224.1 rhamnogalacturonan lyase [Streptomyces sp. OV198] 27570.0e+00
27550.0e+00

PSORT result

LocalizationCertaintyPSORT said
outside0.3000 Seems to have a cleavable N-term signal seq.