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IDSAVERM_1861 TypeCDS
From2285819 nt length864
To2286682 aa length287
Gene pI6.53
Definitionputative DNA-binding protein M.W (Da)32755
NotePF01381: Helix-turn-helix AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6537 hypothetical protein4598.0e-166
samSAM23877_6242 putative DNA-binding protein4595.0e-166
scabSCAB17081 putative DNA-binding protein4512.0e-162

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7547.12e-12

HTH_31Helix-turn-helix19-7231.89.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497815.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12907.5e-179
WP_103841716.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11721.4e-160
WP_189191078.1 helix-turn-helix domain-containing protein [Streptomyces alb... 11572.9e-158
WP_071368185.1 helix-turn-helix domain-containing protein [Streptomyces col... 11547.1e-158
WP_099498425.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 11531.1e-157
WP_028801822.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11451.9e-156
WP_095937627.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11364.9e-155
WP_055493814.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11355.2e-155
WP_119105940.1 helix-turn-helix domain-containing protein [Streptomyces spo... 11355.2e-155
WP_234515737.1 helix-turn-helix transcriptional regulator [Streptomyces glo... 11356.4e-155

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1506 Seems to have no N-terminal signal seq.