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IDSAVERM_1930 TypeCDS
From2359062 nt length1638
To2360699 aa length545
Genechd pI6.33
Definitionputative choline dehydrogenase M.W (Da)59774
NotePF00732: GMC oxidoreductase AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB89021 putative dehydrogenase4035.0e-136
nfarnfa9780 oxidoreductase681.4e-12
cglugi|19554076 COG0562:UDP-galactopyranose mutase [Corynebacterium glutamicum]402.8e-04
paerPA2265 [gene=PA2265] [prot=gluconate dehydrogenase] [comment=PA2265]865.0e-18

*scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GMC_oxred_C1GMC oxidoreductase477-53565.47.2e-18

GMC_oxred_N1GMC oxidoreductase24-30753.22.5e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059207543.1 GMC family oxidoreductase [Streptomyces canus] >gb 26280.0e+00
WP_069762415.1 GMC family oxidoreductase [Streptomyces sp. LUP47B] 26260.0e+00
WP_057610705.1 GMC family oxidoreductase [Streptomyces sp. Root369] >gb 26230.0e+00
WP_062047143.1 GMC family oxidoreductase [Streptomyces canus] >gb 26180.0e+00
WP_053748391.1 GMC family oxidoreductase [Streptomyces sp. MMG1533] >gb 26100.0e+00
WP_190228005.1 GMC family oxidoreductase [Streptomyces umbrinus] >dbj 25990.0e+00
WP_189838001.1 GMC family oxidoreductase [Streptomyces umbrinus] >dbj 25920.0e+00
WP_189191956.1 GMC family oxidoreductase [Streptomyces albiflavescens] >dbj... 25920.0e+00
QIY94175.1 GMC family oxidoreductase [Streptomyces sp. S1D4-11] 25900.0e+00
WP_190169309.1 GMC family oxidoreductase [Streptomyces mirabilis] >dbj 25760.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3060 Seems to have no N-terminal signal seq.