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IDSAVERM_1971 TypeCDS
From2408669 nt length873
To2409541 aa length290
Gene pI10.33
Definitionputative DNA-binding protein M.W (Da)32463
NotePF01381: Helix-turn-helix AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0236 putative DNA-binding protein4613.0e-166

*coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain9-8662.24e-17

HTH_31Helix-turn-helix38-8034.41.5e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_097282484.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13110.0e+00
WP_237511045.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13090.0e+00
WP_078644670.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13031.7e-180
13005.2e-180
WP_225101032.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12981.2e-179
WP_102933047.1 helix-turn-helix transcriptional regulator [Streptomyces mal... 12971.4e-179
WP_014059484.1 helix-turn-helix transcriptional regulator [Streptomyces vio... 12971.6e-179
WP_093707499.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12935.7e-179
WP_153547940.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12936.7e-179
WP_079255700.1 helix-turn-helix transcriptional regulator [Streptomyces aut... 12911.2e-178

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3496 Seems to have no N-terminal signal seq.