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IDSAVERM_1978 TypeCDS
From2418277 nt length2889
To2415389 aa length962
GenehelZ3 pI6.26
Definitionputative SNF2/RAD54 family helicase M.W (Da)102583
NotePF00176: SNF2 family N-terminal domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot CategoryDNA modification & repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6262 putative helicase15610.0e+00
sgrSGR_5543 putative SNF2/RAD54 family helicase13540.0e+00
samSAM23877_5985 putative helicase15130.0e+00
scabSCAB18191 putative SNF2/RAD54 family helicase15060.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain518-773166.46.6e-49

DUF36701SNF2 Helicase protein327-456121.61.9e-35

Helicase_C1Helicase conserved C-terminal domain791-90261.48.9e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_099498705.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 36210.0e+00
WP_075032913.1 DEAD/DEAH box helicase [Streptomyces mirabilis] >emb 36060.0e+00
WP_168501392.1 DEAD/DEAH box helicase [Streptomyces sp. RLB1-33] >gb 35940.0e+00
WP_067384211.1 DEAD/DEAH box helicase [Streptomyces olivochromogenes] >gb 35930.0e+00
WP_143611546.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 35930.0e+00
WP_095937494.1 DEAD/DEAH box helicase [Streptomyces sp. Tue6028] >gb 35910.0e+00
WP_181652722.1 DEAD/DEAH box helicase [Streptomyces sp. WAC00263] >lcl 35880.0e+00
WP_217571060.1 DEAD/DEAH box helicase [Streptomyces sp. GbtcB7] 35880.0e+00
WP_212728303.1 DEAD/DEAH box helicase [Streptomyces mirabilis] >gb 35870.0e+00
WP_097224306.1 DEAD/DEAH box helicase [Streptomyces sp. OV198] >emb 35870.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1702 Seems to have no N-terminal signal seq.