| ID | SAVERM_2005
| Type | CDS
|
| From | 2445049
| nt length | 1263
|
| To | 2446311
| aa length | 420
|
| Gene |
| pI | 4.81
|
| Definition | putative secreted protein
| M.W (Da) | 44322
|
| Note | PF00092: von Willebrand factor type A domain
| AseI frg. | C
|
| SignalP v.4.0 | Signal peptide | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6225 putative secreted protein | 665 | 0.0e+00
|
| sgr | SGR_1075 conserved hypothetical protein | 583 | 0.0e+00
|
| sam | SAM23877_5963 putative secreted protein | 611 | 0.0e+00
|
| scab | SCAB18411 putative secreted protein | 694 | 0.0e+00
|
| mtub | gi|15608619 PROBABLE MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 41 | 7.7e-05
|
| cglu | gi|19552242 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 127 | 9.8e-31
|
| bsub | BG12474 ywmC; similar to hypothetical proteins from B. subtilis | 89 | 2.8e-19
|
| ecoli | gi|16130013 hypothetical protein b2073 [Escherichia coli K12] | 34 | 1.2e-02
|
| paer | PA3073 [gene=PA3073] [prot=hypothetical protein] [comment=PA3073] | 40 | 3.0e-04
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| VWA_2 | 1 | von Willebrand factor type A domain | 42-158 | 43.6 | 3.4e-11
|
| VWA | 1 | von Willebrand factor type A domain | 42-219 | 41.7 | 1.3e-10
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059129508.1 | MULTISPECIES: VWA domain-containing protein [unclassified St...
| 1756 | 0.0e+00 |
| WP_234517441.1 | VWA domain-containing protein [Streptomyces glomeratus] >lcl...
| 1746 | 0.0e+00 |
| WP_188183098.1 | VWA domain-containing protein [Streptomyces sp. TRM S81-3] >...
| 1724 | 0.0e+00 |
| WP_152894752.1 | VWA domain-containing protein [Streptomyces adustus] >gb
| 1720 | 0.0e+00 |
| WP_124438178.1 | VWA domain-containing protein [Streptomyces sp. NL15-2K]
| 1718 | 0.0e+00 |
| WP_200418116.1 | VWA domain-containing protein [Streptomyces sp. Y2F8-2] >dbj...
| 1716 | 0.0e+00 |
| WP_205382801.1 | VWA domain-containing protein [Streptomyces actuosus] >lcl
| 1714 | 0.0e+00 |
| GCB44863.1 | hypothetical protein SNL152K_2153 [Streptomyces sp. NL15-2K]
| 1710 | 0.0e+00 |
| WP_189932092.1 | VWA domain-containing protein [Streptomyces aurantiogriseus]...
| 1710 | 0.0e+00 |
| WP_099498729.1 | MULTISPECIES: VWA domain-containing protein [Streptomyces] >...
| 1709 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2508 | Seems to have a cleavable N-term signal seq.
|