| ID | SAVERM_2008
| Type | CDS
|
| From | 2448255
| nt length | 1209
|
| To | 2449463
| aa length | 402
|
| Gene | aspB1
| pI | 5.77
|
| Definition | putative aspartate aminotransferase
| M.W (Da) | 44554
|
| Note | PF00155: Aminotransferase class I and II
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6222 putative aminotransferase | 789 | 0.0e+00
|
| sgr | SGR_5548 putative aminotransferase | 755 | 0.0e+00
|
| sam | SAM23877_5960 putative aminotransferase | 774 | 0.0e+00
|
| scab | SCAB18441 putative aspartate aminotransferase | 799 | 0.0e+00
|
| nfar | nfa54270 aminotransferase | 555 | 2.6e-159
|
| mtub | gi|15607478 aspartate aminotransferase [Mycobacterium tuberculosis H37Rv] | 553 | 9.7e-159
|
| cglu | gi|19554035 COG0436:PLP-dependent aminotransferases [Corynebacterium glutamicum] | 543 | 7.1e-156
|
| ecoli | gi|16130225 aspartate aminotransferase [Escherichia coli K12] | 570 | 4.5e-164
|
| paer | PA2828 [gene=PA2828] [prot=probable aminotransferase] [comment=PA2828] | 585 | 3.1e-168
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Aminotran_1_2 | 1 | Aminotransferase class I and II | 34-393 | 174.3 | 3.7e-51
|
| DegT_DnrJ_EryC1 | 1 | DegT/DnrJ/EryC1/StrS aminotransferase family | 109-205 | 24.4 | 1.5e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189191783.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 2018 | 0.0e+00 |
| WP_168530812.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 2006 | 0.0e+00 |
| WP_151480165.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 2005 | 0.0e+00 |
| WP_005482185.1 | MULTISPECIES: pyridoxal phosphate-dependent aminotransferase...
| 2003 | 0.0e+00 |
| WP_153287946.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 1999 | 0.0e+00 |
| WP_215450306.1 | MULTISPECIES: pyridoxal phosphate-dependent aminotransferase...
| 1999 | 0.0e+00 |
| WP_095937399.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 1999 | 0.0e+00 |
| WP_099967713.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 1998 | 0.0e+00 |
| WP_059081365.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 1998 | 0.0e+00 |
| WP_097249110.1 | pyridoxal phosphate-dependent aminotransferase [Streptomyces...
| 1997 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1468 | Seems to have no N-terminal signal seq.
|