| ID | SAVERM_2024
| Type | CDS
|
| From | 2464761
| nt length | 858
|
| To | 2465618
| aa length | 285
|
| Gene | gip
| pI | 4.42
|
| Definition | putative hydroxypyruvate isomerase
| M.W (Da) | 30391
|
| Note | PF01261: Xylose isomerase-like TIM barrel
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | specific pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6206 putative oxidoreductase | 489 | 4.0e-178
|
| sgr | SGR_1321 putative oxidoreductase | 426 | 8.0e-153
|
| sam | SAM23877_5946 putative hydroxypyruvate isomerase | 476 | 1.0e-172
|
| scab | SCAB18571 putative hydroxypyruvate isomerase | 428 | 2.0e-153
|
| sace | SACE_6731 xylose isomerase domain protein TIM barrel | 251 | 4.0e-84
|
| cglu | gi|19553669 COG3622:Hydroxypyruvate isomerase [Corynebacterium glutamicum] | 93 | 9.6e-21
|
| ecoli | gi|16128492 hydroxpyruvate isomerase [Escherichia coli K12] | 139 | 1.6e-34
|
| paer | PA1501 [gene=PA1501] [prot=conserved hypothetical protein] [comment=PA1501] | 146 | 2.4e-36
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AP_endonuc_2 | 1 | Xylose isomerase-like TIM barrel | 32-236 | 101.0 | 5.5e-29
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1447 | Seems to have no N-terminal signal seq.
|