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IDSAVERM_2042 TypeCDS
From2491605 nt length1407
To2490199 aa length468
Gene pI8.75
Definitionputative DNA-binding protein M.W (Da)52384
NotePF06114: Domain of unknown function (DUF955) AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0981 putative DNA-binding protein7610.0e+00
sgrSGR_1642 putative DNA-binding protein8030.0e+00
nfarnfa52530 DNA-binding protein4931.9e-140
mtubgi|15607606 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv]5239.9e-150
cglugi|19551615 COG1396:Predicted transcriptional regulators [Corynebacterium glutamicum]4521.5e-128

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF20831Predicted transcriptional regulator (DUF2083)305-461240.37.1e-72

Peptidase_M781IrrE N-terminal-like domain191-30475.33.5e-21

HTH_31Helix-turn-helix10-6252.73.1e-14

HTH_311Helix-turn-helix domain7-6049.92.7e-13

HTH_191Helix-turn-helix domain7-6145.36e-12

HTH_261Cro/C1-type HTH DNA-binding domain9-6025.99.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497847.1 short-chain fatty acyl-CoA regulator family protein [Strepto... 23550.0e+00
WP_208680568.1 XRE family transcriptional regulator [Streptomyces sp. ID386... 21700.0e+00
WP_159485669.1 XRE family transcriptional regulator [Streptomyces libani] >... 21650.0e+00
WP_093648306.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 21620.0e+00
WP_127153452.1 XRE family transcriptional regulator [Streptomyces lydicus] ... 21530.0e+00
WP_202466285.1 short-chain fatty acyl-CoA regulator family protein [Strepto... 21340.0e+00
WP_097283738.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 21260.0e+00
WP_143607500.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 21220.0e+00
WP_143600927.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 21210.0e+00
WP_055569639.1 XRE family transcriptional regulator [Streptomyces atriruber... 21180.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1404 Seems to have no N-terminal signal seq.