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IDSAVERM_2079 TypeCDS
From2532463 nt length1743
To2530721 aa length580
GenepoxB2 pI7.4
Definitionputative pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors M.W (Da)62535
NotePF02776: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorymain glycolytic pathways


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6155 pyruvate dehydrogenase10620.0e+00
sgrSGR_1364 putative pyruvate dehydrogenase10480.0e+00
samSAM23877_5870 pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding10570.0e+00
saceSACE_1218 pyruvate dehydrogenase7700.0e+00
cglugi|19553809 COG0028:Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Corynebacterium glutamicum]6740.0e+00
ecoligi|16128839 pyruvate dehydrogenase [Escherichia coli K12]6153.2e-177
paerPA5297 [gene=poxB] [prot=pyruvate dehydrogenase (cytochrome)] [comment=PA5297]4716.0e-134

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TPP_enzyme_N1Thiamine pyrophosphate enzyme, N-terminal TPP binding domain5-171158.79.4e-47

TPP_enzyme_C1Thiamine pyrophosphate enzyme, C-terminal TPP binding domain383-529140.73e-41

TPP_enzyme_M1Thiamine pyrophosphate enzyme, central domain192-320100.65.3e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_212726725.1 pyruvate dehydrogenase [Streptomyces mirabilis] >gb 29110.0e+00
WP_168496950.1 pyruvate dehydrogenase [Streptomyces sp. RLB1-33] >gb 29080.0e+00
WP_054236969.1 MULTISPECIES: pyruvate dehydrogenase [unclassified Streptomy... 29020.0e+00
WP_055615036.1 pyruvate dehydrogenase [Streptomyces phaeochromogenes] 29010.0e+00
QIY99024.1 pyruvate dehydrogenase [Streptomyces sp. S1D4-11] 29000.0e+00
WP_095851945.1 MULTISPECIES: pyruvate dehydrogenase [unclassified Streptomy... 29000.0e+00
WP_067375663.1 pyruvate dehydrogenase [Streptomyces olivochromogenes] >gb 28990.0e+00
WP_143603297.1 MULTISPECIES: pyruvate dehydrogenase [unclassified Streptomy... 28980.0e+00
WP_099920055.1 pyruvate dehydrogenase [Streptomyces sp. GbtcB7] 28970.0e+00
WP_190171537.1 pyruvate dehydrogenase [Streptomyces mirabilis] >dbj 28970.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.0457 Seems to have no N-terminal signal seq.