-- | --

IDSAVERM_2175 TypeCDS
From2648187 nt length876
To2649062 aa length291
Gene pI9.86
Definitionputative DNA-binding protein M.W (Da)32812
NotePF01381: Helix-turn-helix AseI frg.O
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7579 putative DNA binding protein5030.0e+00
scabSCAB20421 putative DNA-binding protein5290.0e+00

*coel, Streptomyces coelicolor A3(2); scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain18-7756.91.8e-15

HTH_31Helix-turn-helix22-7337.61.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497862.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14300.0e+00
WP_151481788.1 helix-turn-helix domain-containing protein [Streptomyces alb... 14190.0e+00
WP_103838829.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14110.0e+00
WP_189770599.1 helix-turn-helix domain-containing protein [Streptomyces tau... 14040.0e+00
WP_143638520.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14020.0e+00
WP_210888842.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14000.0e+00
WP_200395290.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14000.0e+00
WP_217455783.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14000.0e+00
WP_107021995.1 helix-turn-helix domain-containing protein [Streptomyces dio... 13980.0e+00
NGO44565.1 helix-turn-helix domain-containing protein [Streptomyces ureilyti... 13950.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1016 Seems to have no N-terminal signal seq.