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IDSAVERM_218 TypeCDS
From255270 nt length408
To255677 aa length135
Gene pI4.74
Definitionputative XRE-family transcriptional regulator M.W (Da)15202
NotePF01381: Helix-turn-helix AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
nfarnfa9450 hypothetical protein421.1e-05
cglugi|19551915 COG1396:Predicted transcriptional regulators [Corynebacterium glutamicum]357.5e-04
bsubBG12101 ydcN; similar to transcriptional regulator (phage-related) (Xre family)411.7e-05
paerPA0906 [gene=PA0906] [prot=probable transcriptional regulator] [comment=PA0906]351.8e-03

*nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix22-7542.45.1e-11

HTH_191Helix-turn-helix domain19-8036.92.5e-09

HTH_311Helix-turn-helix domain17-7434.32.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189151792.1 helix-turn-helix domain-containing protein [Streptomyces lac... 6757.7e-90
WP_062777333.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6671.2e-88
WP_055612185.1 helix-turn-helix domain-containing protein [Streptomyces pha... 6652.9e-88
WP_030790004.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6481.2e-85
WP_119580084.1 helix-turn-helix domain-containing protein [Streptomyces eur... 6427.3e-85
WP_055567776.1 helix-turn-helix domain-containing protein [Streptomyces atr... 6383.8e-84
WP_161336662.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6358.9e-84
WP_190216019.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6322.6e-83
WP_223000257.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6304.9e-83
WP_058846723.1 helix-turn-helix domain-containing protein [Streptomyces sil... 6297.2e-83

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3769 Seems to have no N-terminal signal seq.