| ID | SAVERM_2228
| Type | CDS
|
| From | 2708297
| nt length | 1068
|
| To | 2707230
| aa length | 355
|
| Gene | hemE
| pI | 5.12
|
| Definition | putative uroporphyrinogen decarboxylase
| M.W (Da) | 38383
|
| Note | PF01208: Uroporphyrinogen decarboxylase (URO-D)
| AseI frg. | O
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of coenzymes & prosthetic groups
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6031 uroporphyrinogen decarboxylase | 625 | 0.0e+00
|
| sgr | SGR_1473 putative uroporphyrinogen decarboxylase | 626 | 0.0e+00
|
| sam | SAM23877_5749 Uroporphyrinogen decarboxylase | 660 | 0.0e+00
|
| scab | SCAB20861 putative uroporphyrinogen decarboxylase | 635 | 0.0e+00
|
| sace | SACE_1836 uroporphyrinogen decarboxylase (partial match) | 423 | 2.0e-149
|
| nfar | nfa37380 hemE uroporphyrinogen decarboxylase | 440 | 7.9e-125
|
| mtub | gi|15609815 uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Rv] | 375 | 2.4e-105
|
| cglu | gi|19551680 COG0407:Uroporphyrinogen-III decarboxylase [Corynebacterium glutamicum] | 359 | 1.2e-100
|
| bsub | BG10429 hemE; uroporphyrinogen III decarboxylase [EC:4.1.1.37] | 347 | 6.1e-97
|
| ecoli | gi|16131827 uroporphyrinogen decarboxylase [Escherichia coli K12] | 260 | 1.1e-70
|
| paer | PA5034 [gene=hemE] [prot=uroporphyrinogen decarboxylase] [comment=PA5034] | 261 | 6.8e-71
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| URO-D | 1 | Uroporphyrinogen decarboxylase (URO-D) | 17-351 | 440.1 | 5.2e-132
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_054234005.1 | MULTISPECIES: uroporphyrinogen decarboxylase [unclassified S...
| 1688 | 0.0e+00 |
| WP_181649743.1 | uroporphyrinogen decarboxylase [Streptomyces sp. WAC00263] >...
| 1685 | 0.0e+00 |
| QIY98860.1 | uroporphyrinogen decarboxylase [Streptomyces sp. S1D4-11]
| 1682 | 0.0e+00 |
| WP_075030526.1 | uroporphyrinogen decarboxylase [Streptomyces mirabilis] >emb...
| 1678 | 0.0e+00 |
| WP_168496633.1 | MULTISPECIES: uroporphyrinogen decarboxylase [Streptomyces] ...
| 1666 | 0.0e+00 |
| WP_067375474.1 | uroporphyrinogen decarboxylase [Streptomyces olivochromogene...
| 1666 | 0.0e+00 |
| WP_095937228.1 | uroporphyrinogen decarboxylase [Streptomyces sp. Tue6028] >g...
| 1666 | 0.0e+00 |
| WP_099499049.1 | MULTISPECIES: uroporphyrinogen decarboxylase [Streptomyces] ...
| 1664 | 0.0e+00 |
| WP_189188363.1 | uroporphyrinogen decarboxylase [Streptomyces albiflavescens]...
| 1663 | 0.0e+00 |
| NGO45303.1 | uroporphyrinogen decarboxylase [Streptomyces ureilyticus]
| 1660 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1001 | Seems to have no N-terminal signal seq.
|