| ID | SAVERM_2243
| Type | CDS
|
| From | 2730330
| nt length | 1524
|
| To | 2728807
| aa length | 507
|
| Gene |
| pI | 9.26
|
| Definition | putative cationic amino acid transporter
| M.W (Da) | 54006
|
| Note | PF00324: Amino acid permease
| AseI frg. | O
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6014 putative cationic amino acid transporter | 832 | 0.0e+00
|
| sgr | SGR_1494 putative cationic amino acid transporter | 783 | 0.0e+00
|
| sam | SAM23877_5730 putative amino acid permease YfnA | 846 | 0.0e+00
|
| scab | SCAB20981 putative cationic amino acid transporter | 860 | 0.0e+00
|
| sace | SACE_5605 amino acid permease-associated region | 538 | 0.0e+00
|
| nfar | nfa48500 transporter permease | 542 | 3.0e-155
|
| mtub | gi|15610389 POSSIBLE CATIONIC AMINO ACID TRANSPORT INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 488 | 3.9e-139
|
| bsub | BG12972 yfnA; putative amino acid transporter | 460 | 9.8e-131
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AA_permease_2 | 1 | Amino acid permease | 29-472 | 179.4 | 9.4e-53
|
| AA_permease | 1 | Amino acid permease | 34-424 | 148.9 | 1.6e-43
|
| AA_permease_C | 1 | C-terminus of AA_permease | 435-485 | 74.5 | 4.8e-21
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.6668 | Seems to have no N-terminal signal seq.
|