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IDSAVERM_226 TypeCDS
From266317 nt length1767
To264551 aa length588
Gene pI11.03
Definitionputative reverse transcriptase homolog; similar to GII intron M.W (Da)67532
NotePF00078: Reverse transcriptase (RNA-dependent DNA polymerase) AseI frg.A
SignalP v.4.0Non-secretory protein | plot CategoryDNA replication


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4713 HNH endonuclease domain protein6460.0e+00
saceSACE_2315 RNA-directed DNA polymerase992.0e-23
mtubgi|15607213 POSSIBLE MATURASE [Mycobacterium tuberculosis H37Rv]888.1e-19
ecoligi|16128243 CP4-6 prophage; putative reverse transcriptase [Escherichia coli K12]1527.7e-38

*sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RVT_11Reverse transcriptase (RNA-dependent DNA polymerase)119-333140.26.4e-41

RVT_N1N-terminal domain of reverse transcriptase21-10293.75.7e-27

GIIM1Group II intron, maturase-specific domain350-42776.98.4e-22

HNH1HNH endonuclease534-56832.09.6e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497604.1 group II intron reverse transcriptase/maturase [Streptomyces... 30900.0e+00
WP_125762079.1 group II intron reverse transcriptase/maturase [Streptomyces... 29560.0e+00
WP_018536345.1 MULTISPECIES: group II intron reverse transcriptase/maturase... 29500.0e+00
WP_220295161.1 group II intron reverse transcriptase/maturase [Streptomyces... 29100.0e+00
WP_235991000.1 HNH endonuclease [Streptomyces ureilyticus] 24290.0e+00
BAJ30100.1 putative group II intron-encoded protein [Kitasatospora setae KM... 20510.0e+00
WP_033260169.1 MULTISPECIES: group II intron reverse transcriptase/maturase... 20440.0e+00
WP_221909710.1 group II intron reverse transcriptase/maturase [Streptomyces... 20070.0e+00
WP_125523029.1 group II intron reverse transcriptase/maturase [Streptomyces... 20040.0e+00
20020.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.5324 Seems to have no N-terminal signal seq.