| ID | SAVERM_2308
| Type | CDS
|
| From | 2811277
| nt length | 843
|
| To | 2812119
| aa length | 280
|
| Gene |
| pI | 6.43
|
| Definition | putative regulatory protein
| M.W (Da) | 30967
|
| Note | PF07848: PaaX-like protein
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5982 putative regulator | 459 | 6.0e-166
|
| sgr | SGR_1565 putative PaaX-like regulatory protein | 356 | 1.0e-125
|
| sam | SAM23877_5696 Regulator | 451 | 9.0e-163
|
| scab | SCAB23121 putative PaaX-like regulatory protein | 442 | 5.0e-159
|
| sace | SACE_3137 repressor in the phenylacetic acid catabolism | 238 | 1.0e-78
|
| nfar | nfa12510 hypothetical protein | 223 | 1.9e-59
|
| mtub | gi|15607814 hypothetical protein Rv0674 [Mycobacterium tuberculosis H37Rv] | 58 | 6.2e-10
|
| ecoli | gi|16129360 transcriptional repressor for phenylacetic acid degradation [Escherichia coli K12] | 69 | 2.0e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PaaX_C | 1 | PaaX-like protein C-terminal domain | 174-268 | 99.2 | 1.1e-28
|
| PaaX | 1 | PaaX-like protein | 10-76 | 75.3 | 3.1e-21
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_123992138.1 | PaaX family transcriptional regulator [Streptomyces sp. A2-1...
| 1089 | 2.7e-148 |
| WP_030605906.1 | PaaX family transcriptional regulator [Streptomyces fulvovio...
| 1076 | 2.4e-146 |
| QIY98831.1 | PaaX family transcriptional regulator [Streptomyces sp. S1D4-11]
| 1075 | 4.0e-146 |
| WP_059207162.1 | PaaX family transcriptional regulator [Streptomyces canus] >...
| 1074 | 4.6e-146 |
| WP_057611227.1 | PaaX family transcriptional regulator [Streptomyces sp. Root...
| 1073 | 7.1e-146 |
| WP_073939264.1 | PaaX family transcriptional regulator [Streptomyces sp. TSRI...
| 1073 | 8.6e-146 |
| WP_062036071.1 | PaaX family transcriptional regulator [Streptomyces canus] >...
| 1072 | 1.1e-145 |
| WP_171116240.1 | MULTISPECIES: PaaX family transcriptional regulator [Strepto...
| 1071 | 1.3e-145 |
| WP_053751597.1 | PaaX family transcriptional regulator [Streptomyces sp. MMG1...
| 1070 | 2.1e-145 |
| WP_095852136.1 | MULTISPECIES: PaaX family transcriptional regulator [unclass...
| 1069 | 3.3e-145 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0455 | Seems to have no N-terminal signal seq.
|