| ID | SAVERM_2319
| Type | CDS
|
| From | 2823934
| nt length | 1008
|
| To | 2822927
| aa length | 335
|
| Gene | argF
| pI | 4.87
|
| Definition | putative ornithine carbamoyltransferase
| M.W (Da) | 36610
|
| Note | PF00185: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5976 argF ornithine carbamoyltransferase ArcB | 586 | 0.0e+00
|
| sgr | SGR_1572 putative ornithine carbamoyltransferase | 531 | 0.0e+00
|
| sam | SAM23877_5691 ornithine carbamoyltransferase 1 | 553 | 0.0e+00
|
| scab | SCAB23141 putative ornithine carbamoyltransferase | 578 | 0.0e+00
|
| sace | SACE_5258 ornithine carbamoyltransferase | 204 | 1.0e-64
|
| nfar | nfa19400 argF ornithine carbamoyltransferase | 209 | 2.7e-55
|
| mtub | gi|15608794 ornithine carbamoyltransferase [Mycobacterium tuberculosis H37Rv] | 197 | 6.3e-52
|
| cglu | gi|19552615 COG0078:Ornithine carbamoyltransferase [Corynebacterium glutamicum] | 192 | 1.9e-50
|
| bsub | BG10197 argF; ornithine carbamoyltransferase, anabolic [EC:2.1.3.3] | 195 | 2.8e-51
|
| ecoli | gi|16132076 ornithine carbamoyltransferase [Escherichia coli K12] | 406 | 8.9e-115
|
| paer | PA5172 [gene=arcB] [prot=ornithine carbamoyltransferase, catabolic] [comment=PA5172] | 415 | 3.4e-117
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| OTCace | 1 | Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain | 159-332 | 165.1 | 1.2e-48
|
| OTCace_N | 1 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain | 11-151 | 154.7 | 1.5e-45
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_235458733.1 | ornithine carbamoyltransferase [Streptomyces olivochromogene...
| 1564 | 0.0e+00 |
| WP_055494739.1 | ornithine carbamoyltransferase [Streptomyces sp. TP-A0356]
| 1564 | 0.0e+00 |
| WP_121895445.1 | ornithine carbamoyltransferase [Streptomyces shenzhenensis] ...
| 1554 | 0.0e+00 |
| WP_189312316.1 | ornithine carbamoyltransferase [Streptomyces brasiliensis] >...
| 1551 | 0.0e+00 |
| WP_094216319.1 | MULTISPECIES: ornithine carbamoyltransferase [Streptomyces] ...
| 1551 | 0.0e+00 |
| WP_232646921.1 | ornithine carbamoyltransferase [Streptomyces sp. NR30] >lcl
| 1549 | 0.0e+00 |
| WP_123973249.1 | ornithine carbamoyltransferase [Streptomyces sp. Ag109_O5-1]...
| 1549 | 0.0e+00 |
| WP_217547267.1 | ornithine carbamoyltransferase [Streptomyces sp. GbtcB6]
| 1548 | 0.0e+00 |
| WP_067003979.1 | ornithine carbamoyltransferase [Streptomyces cellostaticus] ...
| 1547 | 0.0e+00 |
| WP_189262440.1 | ornithine carbamoyltransferase [Streptomyces fuscichromogene...
| 1545 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3658 | Seems to have no N-terminal signal seq.
|