| ID | SAVERM_2401
| Type | CDS
|
| From | 2927949
| nt length | 462
|
| To | 2928410
| aa length | 153
|
| Gene |
| pI | 6.73
|
| Definition | putative secreted protein
| M.W (Da) | 16618
|
| Note |
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5866 hypothetical protein | 223 | 1.0e-76
|
| sgr | SGR_1666 conserved hypothetical protein | 189 | 2.0e-63
|
| sam | SAM23877_5566 putative alanine rich transmembrane protein | 224 | 3.0e-77
|
| scab | SCAB24041 putative secreted protein | 262 | 4.0e-92
|
| sace | SACE_1806 hypothetical protein | 70 | 7.0e-16
|
| nfar | nfa37540 hypothetical protein | 46 | 1.3e-06
|
| mtub | gi|15609835 PROBABLE CONSERVED ALANINE RICH TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 67 | 4.1e-13
|
| cglu | gi|19553110 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 54 | 2.6e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3093 | 1 | Protein of unknown function (DUF3093) | 8-146 | 155.1 | 1.2e-45
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188271.1 | DUF3093 domain-containing protein [Streptomyces albiflavesce...
| 502 | 6.5e-63 |
| WP_095937139.1 | DUF3093 domain-containing protein [Streptomyces sp. Tue6028]...
| 500 | 1.6e-62 |
| WP_028802255.1 | DUF3093 domain-containing protein [Streptomyces sp. 142MFCol...
| 499 | 1.7e-62 |
| WP_168496468.1 | MULTISPECIES: DUF3093 domain-containing protein [Streptomyce...
| 496 | 5.3e-62 |
| WP_067375327.1 | MULTISPECIES: DUF3093 domain-containing protein [Streptomyce...
| 495 | 7.9e-62 |
| WP_075030590.1 | DUF3093 domain-containing protein [Streptomyces mirabilis] >...
| 495 | 7.9e-62 |
| WP_054229929.1 | MULTISPECIES: DUF3093 domain-containing protein [unclassifie...
| 495 | 7.9e-62 |
| WP_190172393.1 | DUF3093 domain-containing protein [Streptomyces mirabilis] >...
| 493 | 1.4e-61 |
| WP_107459960.1 | DUF3093 domain-containing protein [Streptomyces sp. A244] >g...
| 492 | 2.0e-61 |
| WP_184850802.1 | DUF3093 domain-containing protein [Streptomyces violaceochro...
| 492 | 2.1e-61 |
PSORT result
| Localization | Certainty | PSORT said
|
| outside | 0.3000 | Seems to have a cleavable N-term signal seq.
|