| ID | SAVERM_2403
| Type | CDS
|
| From | 2929782
| nt length | 297
|
| To | 2929486
| aa length | 98
|
| Gene |
| pI | 4.15
|
| Definition | hypothetical protein
| M.W (Da) | 11033
|
| Note |
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5864 hypothetical protein | 199 | 5.0e-69
|
| sgr | SGR_1668 conserved hypothetical protein | 188 | 1.0e-64
|
| sam | SAM23877_5564 hypothetical protein | 199 | 5.0e-69
|
| scab | SCAB24061 hypothetical protein | 201 | 1.0e-69
|
| sace | SACE_1805 hypothetical protein | 138 | 6.0e-45
|
| nfar | nfa37550 hypothetical protein | 141 | 7.2e-36
|
| mtub | gi|15609836 hypothetical protein Rv2699c [Mycobacterium tuberculosis H37Rv] | 143 | 2.4e-36
|
| cglu | gi|19553112 COG0085:DNA-directed RNA polymerase beta subunit/140 kD subunit (split gene in Mjan, Mthe, Aful) [Corynebacterium glutamicum] | 88 | 4.9e-20
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF4193 | 1 | Domain of unknown function (DUF4193) | 1-97 | 152.2 | 4.1e-45
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_005481602.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 419 | 6.1e-52 |
| WP_055544889.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 417 | 1.3e-51 |
| WP_037654155.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 416 | 1.5e-51 |
| WP_235474357.1 | DUF4193 domain-containing protein [Streptomyces sp. GQFP] >l...
| 416 | 1.5e-51 |
| WP_003997302.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 416 | 1.8e-51 |
| WP_077970787.1 | DUF4193 domain-containing protein [Streptomyces tsukubensis]...
| 415 | 2.7e-51 |
| WP_030680288.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 414 | 2.9e-51 |
| WP_055563079.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 414 | 3.8e-51 |
| WP_030357326.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 414 | 3.8e-51 |
| WP_006380512.1 | MULTISPECIES: DUF4193 domain-containing protein [Streptomyce...
| 414 | 3.9e-51 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5155 | Seems to have no N-terminal signal seq.
|