| ID | SAVERM_2411
| Type | CDS
|
| From | 2938603
| nt length | 1047
|
| To | 2939649
| aa length | 348
|
| Gene |
| pI | 4.79
|
| Definition | putative DNA-binding protein
| M.W (Da) | 38369
|
| Note | PF05524: PEP-utilising enzyme, N-terminal
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5855 hypothetical protein | 532 | 0.0e+00
|
| sgr | SGR_1677 conserved hypothetical protein | 533 | 0.0e+00
|
| sam | SAM23877_5554 DNA-binding protein | 532 | 0.0e+00
|
| scab | SCAB24141 putative DNA-binding protein | 548 | 0.0e+00
|
| sace | SACE_0629 hypothetical protein | 147 | 2.0e-42
|
| nfar | nfa6540 hypothetical protein | 155 | 4.9e-39
|
| mtub | gi|15608023 hypothetical protein Rv0883c [Mycobacterium tuberculosis H37Rv] | 130 | 1.7e-31
|
| cglu | gi|19552054 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 68 | 3.3e-13
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3071 | 1 | Protein of unknown function (DUF3071) | 1-168 | 187.1 | 2.2e-55
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2138 | Seems to have no N-terminal signal seq.
|