| ID | SAVERM_2475
| Type | CDS
|
| From | 3024536
| nt length | 939
|
| To | 3023598
| aa length | 312
|
| Gene | miaA
| pI | 5.48
|
| Definition | putative delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase
| M.W (Da) | 33876
|
| Note | PF01715: IPP transferase
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | RNA modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5791 putative tRNA delta(2)- isopentenylpyrophosphate transferase | 573 | 0.0e+00
|
| sgr | SGR_1729 putative tRNA delta(2)-isopentenylpyrophosphate transferase | 492 | 6.0e-178
|
| sam | SAM23877_5494 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase | 573 | 0.0e+00
|
| scab | SCAB24771 putative delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase | 545 | 0.0e+00
|
| sace | SACE_1752 tRNA delta(2)-isopentenylpyrophosphate transferase | 337 | 8.0e-117
|
| nfar | nfa38310 miaA delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase | 316 | 1.5e-87
|
| mtub | gi|15609864 tRNA delta(2)-isopentenylpyrophosphate transferase [Mycobacterium tuberculosis H37Rv] | 297 | 7.0e-82
|
| cglu | gi|19553149 COG0324:tRNA delta(2)-isopentenylpyrophosphate transferase [Corynebacterium glutamicum] | 289 | 1.0e-79
|
| bsub | BG12617 miaA; tRNA isopentenylpyrophosphate transferase [EC:2.5.1.8] | 210 | 7.6e-56
|
| ecoli | gi|16131993 tRNA delta(2)-isopentenylpyrophosphate transferase [Escherichia coli K12] | 183 | 1.1e-47
|
| paer | PA4945 [gene=miaA] [prot=delta 2-isopentenylpyrophosphate transferase] [comment=PA4945] | 186 | 1.8e-48
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| IPPT | 1 | IPP transferase | 43-285 | 244.2 | 1.3e-72
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_151477609.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1400 | 0.0e+00 |
| WP_189188207.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1394 | 0.0e+00 |
| WP_053749216.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1390 | 0.0e+00 |
| QIY98697.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Streptomyc...
| 1390 | 0.0e+00 |
| WP_217237353.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1388 | 0.0e+00 |
| WP_073930634.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1387 | 0.0e+00 |
| WP_217246319.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1386 | 0.0e+00 |
| NUR65550.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Streptomyc...
| 1385 | 0.0e+00 |
| WP_073731738.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1384 | 0.0e+00 |
| WP_143656000.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Strep...
| 1382 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|