| ID | SAVERM_2491
| Type | CDS
|
| From | 3039747
| nt length | 948
|
| To | 3038800
| aa length | 315
|
| Gene | recX
| pI | 5.82
|
| Definition | putative regulatory protein RecX
| M.W (Da) | 33381
|
| Note | PF02631: RecX family
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | DNA recombination
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5770 RecX protein | 315 | 9.0e-110
|
| sgr | SGR_1744 putative regulatory protein RecX | 286 | 9.0e-98
|
| sam | SAM23877_5474 Regulatory protein RecX | 301 | 8.0e-103
|
| scab | SCAB24941 putative regulatory protein RecX | 281 | 2.0e-94
|
| sace | SACE_1737 regulatory protein RecX | 147 | 1.0e-44
|
| nfar | nfa38410 recX RecX protein | 137 | 1.2e-33
|
| mtub | gi|15609873 RecA regulator RecX [Mycobacterium tuberculosis H37Rv] | 124 | 6.3e-30
|
| cglu | gi|19553159 COG2137:Uncharacterized BCR [Corynebacterium glutamicum] | 98 | 2.6e-22
|
| bsub | BG12882 yfhG; hypothetical protein | 74 | 8.6e-15
|
| paer | PA3616 [gene=PA3616] [prot=conserved hypothetical protein] [comment=PA3616] | 46 | 3.0e-06
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RecX | 1 | RecX family | 178-298 | 101.6 | 3.7e-29
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189188179.1 | recombination regulator RecX [Streptomyces albiflavescens] >...
| 656 | 8.5e-82 |
| WP_119106318.1 | recombination regulator RecX [Streptomyces sporangiiformans]...
| 648 | 5.4e-81 |
| WP_143628373.1 | MULTISPECIES: recombination regulator RecX [unclassified Str...
| 653 | 5.9e-81 |
| WP_217566240.1 | recombination regulator RecX [Streptomyces sp. GbtcB7]
| 653 | 5.9e-81 |
| WP_181649823.1 | recombination regulator RecX [Streptomyces sp. WAC00263] >lc...
| 653 | 6.2e-81 |
| WP_097286488.1 | MULTISPECIES: recombination regulator RecX [unclassified Str...
| 653 | 6.2e-81 |
| WP_143603110.1 | MULTISPECIES: recombination regulator RecX [unclassified Str...
| 652 | 7.1e-81 |
| WP_079065341.1 | recombination regulator RecX [Streptomyces olivochromogenes]...
| 652 | 7.5e-81 |
| WP_138043467.1 | recombination regulator RecX [Streptomyces montanus] >lcl
| 646 | 1.1e-80 |
| WP_095852258.1 | MULTISPECIES: recombination regulator RecX [unclassified Str...
| 648 | 2.3e-80 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3901 | Seems to have no N-terminal signal seq.
|