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IDSAVERM_2500 TypeCDS
From3047311 nt length4977
To3052287 aa length1658
Genelhr pI6.06
Definitionputative ATP-dependent DNA helicase M.W (Da)175748
NotePF00270: DEAD/DEAH box helicase AseI frg.Q
SignalP v.4.0Non-secretory protein | plot CategoryDNA modification & repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5761 ATP dependent DNA helicase26870.0e+00
sgrSGR_1760 putative ATP-dependent DNA helicase23750.0e+00
samSAM23877_5465 putative ATP-dependent helicase lhr26770.0e+00
scabSCAB25021 putative ATP-dependent DNA helicase27470.0e+00
saceSACE_1730 putative ATP-dependent DNA helicase16600.0e+00
nfarnfa9760 ATP-dependent DNA helicase16040.0e+00
mtubgi|15610432 PROBABLE ATP-DEPENDENT HELICASE LHR (LARGE HELICASE-RELATED PROTEIN) [Mycobacterium tuberculosis H37Rv]15710.0e+00
cglugi|19552073 COG1201:Lhr-like helicases [Corynebacterium glutamicum]13090.0e+00
ecoligi|16129611 member of ATP-dependent helicase superfamily II [Escherichia coli K12]12260.0e+00
paerPA3272 [gene=PA3272] [prot=probable ATP-dependent DNA helicase] [comment=PA3272]7010.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD_assoc1DEAD/H associated669-881262.61.9e-78

DEAD1DEAD/DEAH box helicase28-21194.55.6e-27

Helicase_C1Helicase conserved C-terminal domain280-40547.22.3e-12

ResIII1Type III restriction enzyme, res subunit43-21027.23e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_053201061.1 ATP-dependent helicase [Streptomyces viridochromogenes] >gb 64070.0e+00
WP_048580329.1 ATP-dependent helicase [Streptomyces viridochromogenes] >gb 63880.0e+00
WP_149828335.1 ATP-dependent helicase [Streptomyces tailanensis] 63680.0e+00
WP_093911642.1 ATP-dependent helicase [Streptomyces sp. cf386] >emb 63680.0e+00
WP_141571255.1 ATP-dependent helicase [Streptomyces ipomoeae] >lcl 63620.0e+00
WP_141594832.1 ATP-dependent helicase [Streptomyces ipomoeae] >lcl 63610.0e+00
WP_055494295.1 ATP-dependent helicase [Streptomyces sp. TP-A0356] 63560.0e+00
WP_234513557.1 ATP-dependent helicase [Streptomyces glomeratus] >lcl 63530.0e+00
WP_009317299.1 ATP-dependent helicase [Streptomyces ipomoeae] >gb 63510.0e+00
WP_141585894.1 ATP-dependent helicase [Streptomyces ipomoeae] >lcl 63470.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1510 Seems to have no N-terminal signal seq.