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IDSAVERM_2508 TypeCDS
From3058880 nt length1488
To3057393 aa length495
Gene pI4.38
Definitionhypothetical protein M.W (Da)53256
NotePF00919: Uncharacterized protein family UPF0004 AseI frg.Q
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5752 hypothetical protein8780.0e+00
sgrSGR_1769 conserved hypothetical protein8380.0e+00
samSAM23877_5456 Ribosomal protein S12 methylthiotransferase RimO8810.0e+00
scabSCAB25101 hypothetical protein8430.0e+00
saceSACE_5882 hypothetical protein5810.0e+00
ecoligi|16128803 hypothetical protein b0835 [Escherichia coli K12]2324.8e-62
paerPA0916 [gene=PA0916] [prot=conserved hypothetical protein] [comment=PA0916]2232.4e-59

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UPF00041Uncharacterized protein family UPF00047-105109.75.4e-32

Radical_SAM1Radical SAM superfamily194-36471.21.2e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168530520.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22270.0e+00
WP_189188166.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22260.0e+00
WP_026179567.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22250.0e+00
WP_093629512.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22230.0e+00
WP_189714831.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22230.0e+00
WP_200714642.1 MULTISPECIES: 30S ribosomal protein S12 methylthiotransferas... 22220.0e+00
WP_078651603.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22210.0e+00
WP_026151014.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22190.0e+00
WP_103554037.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22190.0e+00
WP_051801816.1 30S ribosomal protein S12 methylthiotransferase RimO [Strept... 22190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear Seems to have an uncleavable N-term signal seq