| ID | SAVERM_2550
| Type | CDS
|
| From | 3128767
| nt length | 294
|
| To | 3128474
| aa length | 97
|
| Gene |
| pI | 6.96
|
| Definition | hypothetical protein
| M.W (Da) | 10917
|
| Note | PF04456: Protein of unknown function (DUF503)
| AseI frg. | V
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5707 small conserved hypothetical protein | 164 | 2.0e-55
|
| sgr | SGR_1810 conserved hypothetical protein | 182 | 2.0e-62
|
| sam | SAM23877_5428 hypothetical protein | 162 | 2.0e-54
|
| scab | SCAB25341 hypothetical protein | 172 | 2.0e-58
|
| sace | SACE_5925 protein of unknown function DUF503 | 126 | 3.0e-40
|
| nfar | nfa40660 hypothetical protein | 120 | 2.2e-29
|
| mtub | gi|15609254 hypothetical protein Rv2117 [Mycobacterium tuberculosis H37Rv] | 134 | 1.1e-33
|
| bsub | BG10269 ylxP, ymxD; similar to unknown proteins | 54 | 1.0e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF503 | 1 | Protein of unknown function (DUF503) | 3-89 | 112.4 | 6.1e-33
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_234767670.1 | DUF503 domain-containing protein [Streptomyces muensis] >lcl...
| 472 | 4.0e-60 |
| WP_164436504.1 | DUF503 domain-containing protein [Streptomyces sp. SID13726]...
| 471 | 7.0e-60 |
| WP_093725304.1 | DUF503 domain-containing protein [Streptomyces sp. DI166] >e...
| 467 | 2.2e-59 |
| WP_073739168.1 | MULTISPECIES: DUF503 domain-containing protein [Streptomyces...
| 467 | 3.1e-59 |
| WP_173316198.1 | DUF503 domain-containing protein [Streptomyces fulvorobeus]
| 466 | 3.7e-59 |
| WP_030315687.1 | MULTISPECIES: DUF503 domain-containing protein [Streptomyces...
| 465 | 4.5e-59 |
| WP_030085244.1 | MULTISPECIES: DUF503 domain-containing protein [Streptomyces...
| 465 | 4.5e-59 |
| WP_062723057.1 | DUF503 domain-containing protein [Streptomyces caeruleatus] ...
| 465 | 4.7e-59 |
| WP_007504646.1 | DUF503 domain-containing protein [Streptomyces zinciresisten...
| 465 | 4.8e-59 |
| WP_018531172.1 | MULTISPECIES: DUF503 domain-containing protein [Streptomyces...
| 465 | 5.2e-59 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2690 | Seems to have no N-terminal signal seq.
|