| ID | SAVERM_2562
| Type | CDS
|
| From | 3143086
| nt length | 1305
|
| To | 3141782
| aa length | 434
|
| Gene |
| pI | 9.44
|
| Definition | putative metalloprotease
| M.W (Da) | 46785
|
| Note | PF02163: Peptidase family M50
| AseI frg. | V
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein modification
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5695 putative metalloprotease | 675 | 0.0e+00
|
| sgr | SGR_1822 putative metalloprotease | 647 | 0.0e+00
|
| sam | SAM23877_5416 putative metalloprotease | 691 | 0.0e+00
|
| scab | SCAB25471 putative metalloprotease | 741 | 0.0e+00
|
| sace | SACE_5993 PDZ/DHR/GLGF | 465 | 9.0e-164
|
| nfar | nfa41190 protease | 246 | 2.1e-66
|
| mtub | gi|15610006 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 235 | 4.9e-63
|
| cglu | gi|19553218 COG0750:Predicted membrane-associated Zn-dependent proteases 1 [Corynebacterium glutamicum] | 252 | 2.1e-68
|
| bsub | BG13410 yluC; similar to hypothetical proteins | 108 | 8.0e-25
|
| ecoli | gi|16128169 membrane-associated protease [Escherichia coli K12] | 76 | 3.8e-15
|
| paer | PA3649 [gene=PA3649] [prot=conserved hypothetical protein] [comment=PA3649] | 80 | 3.6e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Peptidase_M50 | 1 | Peptidase family M50 | 13-387 | 157.3 | 3.9e-46
|
| PDZ_2 | 1 | PDZ domain | 180-237 | 42.3 | 6.3e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_171033236.1 | MULTISPECIES: site-2 protease family protein [Streptomyces]
| 2000 | 0.0e+00 |
| WP_075031287.1 | site-2 protease family protein [Streptomyces mirabilis] >emb...
| 1898 | 0.0e+00 |
| QIY98595.1 | site-2 protease family protein [Streptomyces sp. S1D4-11]
| 1896 | 0.0e+00 |
| WP_168496184.1 | MULTISPECIES: site-2 protease family protein [Streptomyces] ...
| 1893 | 0.0e+00 |
| WP_168530479.1 | site-2 protease family protein [Streptomyces sp. RPA4-2] >gb...
| 1892 | 0.0e+00 |
| WP_189189064.1 | site-2 protease family protein [Streptomyces albiflavescens]...
| 1890 | 0.0e+00 |
| WP_101400975.1 | MULTISPECIES: site-2 protease family protein [Streptomyces] ...
| 1886 | 0.0e+00 |
| WP_060901175.1 | site-2 protease family protein [Streptomyces sp. WAC00263] >...
| 1883 | 0.0e+00 |
| WP_067371239.1 | site-2 protease family protein [Streptomyces olivochromogene...
| 1882 | 0.0e+00 |
| WP_054235298.1 | MULTISPECIES: site-2 protease family protein [unclassified S...
| 1882 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5904 | Seems to have an uncleavable N-term signal seq
|