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IDSAVERM_2588 TypeCDS
From3181999 nt length801
To3181199 aa length266
GenepotC2 pI10.58
Definitionputative polyamine ABC transporter permease protein M.W (Da)29139
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.J
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5670 putative polyamine ABC-transporter integral memb rane protein4399.0e-159
sgrSGR_1834 putative polyamine ABC transporter ipermease protein4391.0e-158
samSAM23877_5396 putative polyamine ABC-transporter integral memb rane protein4491.0e-162
scabSCAB25731 putative polyamine ABC transporter permease protein4763.0e-173
ecoligi|16129087 spermidine/putrescine ABC transporter membrane component [Escherichia coli K12]1662.0e-42
paerPA0324 [gene=PA0324] [prot=probable permease of ABC transporter] [comment=PA0324]1701.4e-43

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component83-25855.26.6e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095936975.1 ABC transporter permease [Streptomyces sp. Tue6028] >gb 12261.9e-169
WP_028802503.1 ABC transporter permease [Streptomyces sp. 142MFCol3.1] 12218.4e-169
WP_009190938.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12182.7e-168
WP_085214012.1 ABC transporter permease [Streptomyces sp. Amel2xC10] >emb 12173.8e-168
NUP64848.1 ABC transporter permease [Nonomuraea sp.] 12141.2e-167
WP_019984848.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12131.7e-167
WP_153288298.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12131.8e-167
WP_030796982.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 12122.4e-167
WP_148010719.1 ABC transporter permease [Streptomyces sp. me109] >lcl 12104.8e-167
WP_125194277.1 ABC transporter permease [Streptomyces sp. RP5T] >gb 12071.4e-166

PSORT result

LocalizationCertaintyPSORT said
membrane0.5140 Seems to have an uncleavable N-term signal seq