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IDSAVERM_26 TypeCDS
From33124 nt length573
To32552 aa length190
Genesig1 pI5.41
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)21431
NotePF08281: Sigma-70, region 4 AseI frg.W
SignalP v.4.0Non-secretory protein | plot CategoryRNA initiation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4126-17750.11.5e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_158086596.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ph... 7334.0e-97
OQD51726.1 hypothetical protein BM536_038505 [Streptomyces phaeoluteigriseus... 6436.1e-84
WP_101385773.1 RNA polymerase sigma factor [Streptomyces sp. TLI_146] >gb 5566.3e-70
4316.4e-51
WP_093911479.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 3768.6e-43
WP_171144484.1 RNA polymerase sigma factor [Streptomyces sp. S3(2020)] >gb 3671.7e-41
WP_158696881.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ip... 3533.7e-39
WP_161216002.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 3444.8e-38
WP_107047947.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 3411.4e-37
WP_182774408.1 sigma-70 family RNA polymerase sigma factor [Streptomyces mu... 3342.1e-36

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2748 Seems to have no N-terminal signal seq.