| ID | SAVERM_2621
| Type | CDS
|
| From | 3221674
| nt length | 1107
|
| To | 3220568
| aa length | 368
|
| Gene |
| pI | 8.59
|
| Definition | hypothetical protein
| M.W (Da) | 40475
|
| Note | PF04055: Radical SAM superfamily
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5645 hypothetical protein | 718 | 0.0e+00
|
| sgr | SGR_1858 conserved hypothetical protein | 698 | 0.0e+00
|
| sam | SAM23877_5374 putative dual-specificity RNA methyltransferase RlmN | 721 | 0.0e+00
|
| scab | SCAB25951 hypothetical protein | 739 | 0.0e+00
|
| sace | SACE_6026 predicted Fe-S-cluster redox enzyme | 484 | 6.0e-173
|
| nfar | nfa41250 hypothetical protein | 456 | 1.9e-129
|
| mtub | gi|15610016 hypothetical protein Rv2879c [Mycobacterium tuberculosis H37Rv] | 222 | 3.5e-59
|
| cglu | gi|19553223 COG0820:Predicted Fe-S-cluster redox enzyme [Corynebacterium glutamicum] | 436 | 1.1e-123
|
| bsub | BG13389 yloN; similar to hypothetical proteins | 235 | 3.5e-63
|
| ecoli | gi|16130442 putative pyruvate formate lyase activating enzyme 2 [Escherichia coli K12] | 218 | 5.1e-58
|
| paer | PA3806 [gene=PA3806] [prot=conserved hypothetical protein] [comment=PA3806] | 214 | 7.7e-57
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Radical_SAM | 1 | Radical SAM superfamily | 124-295 | 57.2 | 2.3e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_119102529.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1926 | 0.0e+00 |
| WP_138049212.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1924 | 0.0e+00 |
| WP_190193404.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1924 | 0.0e+00 |
| WP_190039165.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1924 | 0.0e+00 |
| WP_152784144.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1921 | 0.0e+00 |
| WP_131559747.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1921 | 0.0e+00 |
| WP_151483536.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1920 | 0.0e+00 |
| WP_033321199.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1920 | 0.0e+00 |
| WP_152775601.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1919 | 0.0e+00 |
| WP_164374898.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Strept...
| 1918 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2421 | Seems to have no N-terminal signal seq.
|