| ID | SAVERM_2627
| Type | CDS
|
| From | 3227335
| nt length | 927
|
| To | 3226409
| aa length | 308
|
| Gene | rpsB
| pI | 4.83
|
| Definition | putative ribosomal protein S2
| M.W (Da) | 33404
|
| Note | PF00318: Ribosomal protein S2
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5624 30S ribosomal protein S2 | 521 | 0.0e+00
|
| sgr | SGR_1863 putative 30S ribosomal protein S2 | 514 | 0.0e+00
|
| sam | SAM23877_5364 30S ribosomal protein S2 | 525 | 0.0e+00
|
| scab | SCAB26021 putative ribosomal protein S2 | 521 | 0.0e+00
|
| sace | SACE_6038 30S ribosomal protein S2 | 420 | 3.0e-150
|
| nfar | nfa41310 rpsB ribosomal protein S2 | 414 | 3.9e-117
|
| mtub | gi|15610027 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Rv] | 404 | 4.0e-114
|
| cglu | gi|19553229 COG0052:Ribosomal protein S2 [Corynebacterium glutamicum] | 375 | 1.8e-105
|
| bsub | BG19004 rpsB; 30S ribosomal protein S2 | 288 | 2.2e-79
|
| ecoli | gi|16128162 30S ribosomal protein S2 [Escherichia coli K12] | 225 | 3.3e-60
|
| paer | PA3656 [gene=rpsB] [prot=30S ribosomal protein S2] [comment=PA3656] | 229 | 1.8e-61
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S2 | 1 | Ribosomal protein S2 | 9-225 | 317.9 | 2.1e-95
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5088 | Seems to have no N-terminal signal seq.
|