| ID | SAVERM_2633
| Type | CDS
|
| From | 3233579
| nt length | 543
|
| To | 3233037
| aa length | 180
|
| Gene |
| pI | 10.94
|
| Definition | hypothetical protein
| M.W (Da) | 19222
|
| Note | PF02021: Uncharacterised protein family UPF0102
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5602 hypothetical protein | 205 | 1.0e-69
|
| sgr | SGR_1878 conserved hypothetical protein | 172 | 8.0e-57
|
| sam | SAM23877_5358 hypothetical protein | 198 | 4.0e-67
|
| scab | SCAB26081 hypothetical protein | 205 | 2.0e-69
|
| sace | SACE_6045 endonuclease | 91 | 8.0e-25
|
| nfar | nfa41430 hypothetical protein | 92 | 2.0e-20
|
| mtub | gi|15610035 hypothetical protein Rv2898c [Mycobacterium tuberculosis H37Rv] | 66 | 9.2e-13
|
| cglu | gi|19553234 COG0792:Predicted endonuclease distantly related to archaeal Holliday junction resolvase [Corynebacterium glutamicum] | 59 | 8.0e-11
|
| ecoli | gi|16131040 hypothetical protein b3148 [Escherichia coli K12] | 50 | 8.8e-08
|
| paer | PA4424 [gene=PA4424] [prot=conserved hypothetical protein] [comment=PA4424] | 55 | 2.8e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UPF0102 | 1 | Uncharacterised protein family UPF0102 | 71-163 | 82.2 | 2.2e-23
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2764 | Seems to have no N-terminal signal seq.
|